C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19, pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159750 Rps19-ps10-001 ENSMUSG00000089800 10090 - 10:52384659-52385093 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159750
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159750 0.327±0.06 0.209±0.01 0.187±0.00 0.154±0.07 0.457±0.16 0.636±0.39 0.150±0.06 0.208±0.06 0.183±0.14 0.261±0.14 0.182±0.10 0.522±0.27 0.143±0.09 0.124±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221975 RPS19-005 protein_coding Homo_sapiens 0 547
ENST00000405355 RP11-346C16.4-001 processed_pseudogene Homo_sapiens 0 449
ENST00000415286 RPS19P1-001 processed_pseudogene Homo_sapiens 0 484
ENST00000455650 RP11-445N18.3-001 processed_pseudogene Homo_sapiens 0 409
ENST00000457967 RP11-389O22.4-001 processed_pseudogene Homo_sapiens 0 348
ENST00000477321 RP11-289K10.1-001 processed_pseudogene Homo_sapiens 0 440
ENST00000480487 RPS19P3-001 processed_pseudogene Homo_sapiens 0 483
ENST00000593863 RPS19-006 protein_coding Homo_sapiens 0 562
ENST00000598261 RPS19-007 protein_coding Homo_sapiens 0 307
ENST00000598399 RPS19-008 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000598466 RPS19-004 retained_intron Homo_sapiens 0 243
ENST00000598742 RPS19-001 protein_coding Homo_sapiens 0 562
ENST00000600467 RPS19-002 protein_coding Homo_sapiens 0 303
ENST00000601492 RPS19-003 protein_coding Homo_sapiens 0 243

Loading