C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 16199
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160032 Gm16199-001 ENSMUSG00000089936 10090 + 6:120005998-120006285 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSMUST00000160032
Transcript ID Brain Liver
ENSMUST00000160032 0.200±0.00 1.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TY CIL_0007TY_0002 VISTA 6:119665436-120266145
CIL_0008AW CIL_0008AW_0002 VISTA 6:119874234-120475208
CIL_0006C0 CIL_0006C0_0002 CGP 6:119902698-120038672
CIL_0006BZ CIL_0006BZ_0002 CGP 6:119923969-120200339

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308769 RFWD2-010 protein_coding Homo_sapiens 0 401
ENST00000367666 RFWD2-003 protein_coding Homo_sapiens 0 401
ENST00000367667 RFWD2-002 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000367669 RFWD2-001 protein_coding Homo_sapiens 0 401
ENST00000428997 RP11-308N19.5-001 processed_pseudogene Homo_sapiens 0 337
ENST00000461830 RFWD2-004 retained_intron Homo_sapiens 0 401
ENST00000482305 RFWD2-005 retained_intron Homo_sapiens 2e-22 110
ENST00000579008 RFWD2P1-001 processed_pseudogene Homo_sapiens 0 326

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