C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCR4-NOT transcription complex, subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160200 Cnot3-007 ENSMUSG00000035632 10090 + 7:3659390-3661100 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OD CIL_0005OD_0002 CGP 7:3629985-3661108
CIL_0001U4 CIL_0001U4_0002 CGP 7:3645290-3665840

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000136697 cnot3b-001 protein_coding Danio_rerio 9e-26 121
ENSDART00000081485 cnot3b-202 protein_coding Danio_rerio 2e-23 113
ENST00000221232 CNOT3-001 protein_coding Homo_sapiens 0 540
ENST00000222224 LENG1-001 protein_coding Homo_sapiens 0 590
ENST00000358389 CNOT3-003 protein_coding Homo_sapiens 0 538
ENST00000447684 CNOT3-201 protein_coding Homo_sapiens 0 538
ENST00000457463 CNOT3-006 protein_coding Homo_sapiens 1.00053e-42 178
ENST00000471126 CNOT3-011 protein_coding Homo_sapiens 0 761
ENST00000496327 CNOT3-010 processed_transcript Homo_sapiens 2e-34 150
ENST00000610829 CNOT3-217 protein_coding Homo_sapiens 0 538
ENST00000610883 CNOT3-211 protein_coding Homo_sapiens 0 540
ENST00000610998 LENG1-001 protein_coding Homo_sapiens 0.0000000000003 81
ENST00000611252 CNOT3-214 protein_coding Homo_sapiens 0 540
ENST00000611667 CNOT3-224 protein_coding Homo_sapiens 0 538
ENST00000612029 CNOT3-002 retained_intron Homo_sapiens 0 588
ENST00000612466 CNOT3-006 retained_intron Homo_sapiens 0 761
ENST00000612924 CNOT3-205 protein_coding Homo_sapiens 0 540
ENST00000613028 CNOT3-011 protein_coding Homo_sapiens 0 761
ENST00000613073 CNOT3-005 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000613470 CNOT3-010 processed_transcript Homo_sapiens 2e-34 150
ENST00000613528 CNOT3-225 protein_coding Homo_sapiens 0 538
ENST00000613622 LENG1-001 protein_coding Homo_sapiens 4e-22 110
ENST00000613636 CNOT3-208 protein_coding Homo_sapiens 0 538
ENST00000613752 CNOT3-202 protein_coding Homo_sapiens 0 538
ENST00000614037 LENG1-203 protein_coding Homo_sapiens 0.00000000004 73
ENST00000614542 CNOT3-005 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000614598 CNOT3-212 protein_coding Homo_sapiens 0 538
ENST00000614649 CNOT3-206 protein_coding Homo_sapiens 0 538
ENST00000615030 CNOT3-209 protein_coding Homo_sapiens 0 538
ENST00000615034 CNOT3-003 retained_intron Homo_sapiens 0 588
ENST00000615038 CNOT3-005 retained_intron Homo_sapiens 0 590
ENST00000615532 CNOT3-006 protein_coding Homo_sapiens 1.00053e-42 178
ENST00000615629 CNOT3-003 retained_intron Homo_sapiens 0 588
ENST00000616102 CNOT3-220 protein_coding Homo_sapiens 0 538
ENST00000616103 LENG1-001 protein_coding Homo_sapiens 3e-23 113
ENST00000616264 CNOT3-004 protein_coding Homo_sapiens 7.00649e-43 178
ENST00000616359 CNOT3-210 protein_coding Homo_sapiens 0 540
ENST00000616816 LENG1-204 protein_coding Homo_sapiens 0.00000000004 73
ENST00000616910 CNOT3-226 protein_coding Homo_sapiens 0 540
ENST00000617218 CNOT3-207 protein_coding Homo_sapiens 0 538
ENST00000617371 CNOT3-006 retained_intron Homo_sapiens 0 761
ENST00000617592 LENG1-206 protein_coding Homo_sapiens 0.00000000004 73
ENST00000617930 CNOT3-007 retained_intron Homo_sapiens 0 590
ENST00000617936 CNOT3-002 retained_intron Homo_sapiens 0 540
ENST00000617982 CNOT3-001 protein_coding Homo_sapiens 0 540
ENST00000618130 CNOT3-005 retained_intron Homo_sapiens 0 590
ENST00000618405 CNOT3-221 protein_coding Homo_sapiens 0 538
ENST00000618717 CNOT3-001 protein_coding Homo_sapiens 0 538
ENST00000618939 CNOT3-002 retained_intron Homo_sapiens 0 588
ENST00000619316 CNOT3-001 protein_coding Homo_sapiens 0 538
ENST00000619347 CNOT3-203 protein_coding Homo_sapiens 0 538
ENST00000619557 CNOT3-215 protein_coding Homo_sapiens 0 538
ENST00000619567 CNOT3-216 protein_coding Homo_sapiens 0 538
ENST00000619669 LENG1-202 protein_coding Homo_sapiens 0.00000000004 73
ENST00000619854 CNOT3-204 protein_coding Homo_sapiens 0 540
ENST00000620060 CNOT3-222 protein_coding Homo_sapiens 0 540
ENST00000620419 CNOT3-218 protein_coding Homo_sapiens 0 538
ENST00000620573 CNOT3-219 protein_coding Homo_sapiens 0 540
ENST00000620970 CNOT3-003 protein_coding Homo_sapiens 0 538
ENST00000621174 CNOT3-002 retained_intron Homo_sapiens 0 540
ENST00000621285 LENG1-205 protein_coding Homo_sapiens 0.00000000004 73
ENST00000621927 LENG1-201 protein_coding Homo_sapiens 0.00000000004 73
ENST00000622080 CNOT3-004 protein_coding Homo_sapiens 7.00649e-43 178
ENST00000622131 CNOT3-213 protein_coding Homo_sapiens 0 538
ENST00000622193 CNOT3-223 protein_coding Homo_sapiens 0 538
ENST00000622342 CNOT3-007 retained_intron Homo_sapiens 0 590

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