C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G elongation factor, mitochondrial 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160529 Gfm1-003 ENSMUSG00000027774 10090 + 3:67456479-67474804 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000160529
Transcript ID Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000160529 11.557±2.73 22.214±1.38 11.942±0.66 13.103±2.61 14.234±0.80 9.925±0.60 9.656±4.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BN CIL_0008BN_0002 VISTA 3:66846973-67447795
CIL_00086V CIL_00086V_0002 VISTA 3:66870618-67471970
CIL_0008BM CIL_0008BM_0002 VISTA 3:66890932-67492590
CIL_0008KO CIL_0008KO_0002 VISTA 3:66912683-67513884
CIL_000808 CIL_000808_0002 VISTA 3:67009670-67610443
CIL_000815 CIL_000815_0002 VISTA 3:67040647-67641402
CIL_000937 CIL_000937_0002 VISTA 3:67250193-67852228
CIL_0004JV CIL_0004JV_0003 CGP 3:67374097-67476529
CIL_0004JU CIL_0004JU_0003 CGP 3:67430096-67476529

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264263 GFM1-004 protein_coding Homo_sapiens 0 924
ENST00000477721 GFM1-011 retained_intron Homo_sapiens 0 532
ENST00000478254 GFM1-003 nonsense_mediated_decay Homo_sapiens 0 924
ENST00000481468 GFM1-009 retained_intron Homo_sapiens 0 268
ENST00000486715 GFM1-001 protein_coding Homo_sapiens 0 924

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