C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: distal-less homeobox 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160937 Dlx6-001 ENSMUSG00000029754 10090 + 6:6863334-6868568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160937
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160937 0.309±0.29 0.043±0.03 0.013±0.00 1.352±0.84 0.088±0.04 0.151±0.07 0.016±0.00 0.033±0.02 0.036±0.03 0.074±0.04 0.023±0.00 0.631±0.39 0.027±0.01 0.236±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KR CIL_0007KR_0002 UCNEbase 6:6458887-6869817
CIL_0005E8 CIL_0005E8_0002 CGP 6:6557294-6868568
CIL_0008VC CIL_0008VC_0002 VISTA 6:6561655-7162377
CIL_0005LA CIL_0005LA_0003 CGP 6:6863334-6882085

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030326 IGI embryonic limb morphogenesis
GO:0030855 IGI epithelial cell differentiation
GO:0042472 IGI inner ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0048646 IGI anatomical structure formation involved in morphogenesis
GO:0050679 IGI positive regulation of epithelial cell proliferation
GO:0060021 IGI palate development
GO:0060322 IGI head development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102778 dlx6a-001 protein_coding Danio_rerio 5e-19 100
ENST00000493273 DLX6-002 processed_transcript Homo_sapiens 0 660
ENST00000518156 DLX6-001 protein_coding Homo_sapiens 0 1369
ENST00000555308 DLX6-003 protein_coding Homo_sapiens 0 638

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