C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15795
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160969 Gm15795-001 ENSMUSG00000090142 10090 - 1:20444258-20444810 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverOvaryPlacentaENSMUST00000160969
Transcript ID Bladder Brain Kidney Liver Ovary Placenta
ENSMUST00000160969 0.216±0.01 0.013±0.01 0.349±0.16 0.140±0.18 0.147±0.00 0.271±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MX CIL_0005MX_0002 CGP 1:19208914-20618064
CIL_0005N4 CIL_0005N4_0002 CGP 1:20057779-20734496

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 0 527
ENST00000394133 RP11-624L12.1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000396131 RPL17P50-001 processed_pseudogene Homo_sapiens 0 486
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 542
ENST00000404382 RP3-472M2.2-001 processed_pseudogene Homo_sapiens 0 292
ENST00000407033 RPL17P26-001 processed_pseudogene Homo_sapiens 0 534
ENST00000414070 RP11-20O24.4-001 processed_pseudogene Homo_sapiens 0 612
ENST00000417593 RPL17P11-001 processed_pseudogene Homo_sapiens 0 333
ENST00000418495 RPL17-201 protein_coding Homo_sapiens 0 623
ENST00000419491 RPL17P17-001 processed_pseudogene Homo_sapiens 0 427
ENST00000420302 RP11-215A21.2-001 processed_pseudogene Homo_sapiens 0 599
ENST00000422360 RPL17P43-001 processed_pseudogene Homo_sapiens 0 398
ENST00000429025 CTA-440B3.1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000442115 RP11-11M20.2-001 processed_pseudogene Homo_sapiens 0 230
ENST00000444020 RP11-1029M24.1-001 processed_pseudogene Homo_sapiens 0 562
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 531
ENST00000447415 RP4-612B15.2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 527
ENST00000452862 AC144530.1-001 processed_pseudogene Homo_sapiens 0 568
ENST00000456309 RP11-317B3.2-001 processed_pseudogene Homo_sapiens 0 431
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 490
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 562
ENST00000469329 RPL17P41-001 processed_pseudogene Homo_sapiens 0 477
ENST00000471722 RP4-706A16.3-001 processed_pseudogene Homo_sapiens 0 623
ENST00000483964 RP11-7F18.1-001 processed_pseudogene Homo_sapiens 0 488
ENST00000488887 AF131215.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000490729 RPL17P37-001 processed_pseudogene Homo_sapiens 0 387
ENST00000498103 RP11-592N21.1-001 processed_pseudogene Homo_sapiens 0 606
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 562
ENST00000504072 CTD-2218G20.1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000511559 RP11-115A14.1-001 processed_pseudogene Homo_sapiens 0 239
ENST00000560214 RP11-14C10.2-001 processed_pseudogene Homo_sapiens 0 237
ENST00000577910 RPL17-C18orf32-002 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000579248 RPL17-018 protein_coding Homo_sapiens 0 623
ENST00000579408 RPL17-003 protein_coding Homo_sapiens 0 623
ENST00000580210 RPL17-015 protein_coding Homo_sapiens 0 586
ENST00000580261 RPL17-001 protein_coding Homo_sapiens 0 623
ENST00000581373 RPL17-002 protein_coding Homo_sapiens 0 531
ENST00000584364 RPL17-014 retained_intron Homo_sapiens 0 534
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0.000000000002 77
ENST00000605218 RPL17P51-001 processed_pseudogene Homo_sapiens 1e-36 156
ENST00000618613 RPL17-202 protein_coding Homo_sapiens 0 623
ENST00000618619 RPL17-023 protein_coding Homo_sapiens 0 623

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