C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G elongation factor, mitochondrial 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161009 Gfm1-002 ENSMUSG00000027774 10090 + 3:67430116-67458805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161009
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161009 8.703±0.41 29.806±8.80 4.502±0.57 9.551±2.58 11.461±1.46 20.791±1.77 15.675±1.48 14.463±3.49 7.884±1.40 13.519±1.07 11.244±1.56 9.888±6.92 4.416±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BN CIL_0008BN_0002 VISTA 3:66846973-67447795
CIL_00086V CIL_00086V_0002 VISTA 3:66870618-67471970
CIL_0008BM CIL_0008BM_0002 VISTA 3:66890932-67492590
CIL_0008KO CIL_0008KO_0002 VISTA 3:66912683-67513884
CIL_000808 CIL_000808_0002 VISTA 3:67009670-67610443
CIL_000815 CIL_000815_0002 VISTA 3:67040647-67641402
CIL_000937 CIL_000937_0002 VISTA 3:67250193-67852228
CIL_0004JV CIL_0004JV_0003 CGP 3:67374097-67476529
CIL_0004JU CIL_0004JU_0003 CGP 3:67430096-67476529

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264263 GFM1-004 protein_coding Homo_sapiens 0 946
ENST00000312756 GFM1-006 retained_intron Homo_sapiens 0 309
ENST00000478254 GFM1-003 nonsense_mediated_decay Homo_sapiens 0 1578
ENST00000478576 GFM1-002 protein_coding Homo_sapiens 0 1609
ENST00000486715 GFM1-001 protein_coding Homo_sapiens 0 1609
ENST00000490261 GFM1-008 processed_transcript Homo_sapiens 0 309

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