C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adrenergic receptor, alpha 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161339 Adra1a-003 ENSMUSG00000045875 10090 + 14:66635556-66732741 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161339
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161339 1.358±0.16 1.053±0.27 0.045±0.00 1.047±0.26 0.221±0.06 0.902±0.00 1.894±0.50 0.331±0.25 3.062±1.63 0.257±0.00 0.399±0.12 0.022±0.01 0.023±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001985 IMP negative regulation of heart rate involved in baroreceptor response to increased systemic arterial blood pressure
GO:0001994 IMP norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure
GO:0001996 IGI positive regulation of heart rate by epinephrine-norepinephrine
GO:0001997 IGI positive regulation of the force of heart contraction by epinephrine-norepinephrine
GO:0004937 ISO alpha1-adrenergic receptor activity
GO:0005634 ISS nucleus
GO:0007200 IDA phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007512 IGI adult heart development
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016049 IGI cell growth
GO:0031965 ISS nuclear membrane
GO:0035024 ISO negative regulation of Rho protein signal transduction
GO:0035265 IGI organ growth
GO:0043410 IGI positive regulation of MAPK cascade
GO:0045987 IDA positive regulation of smooth muscle contraction
GO:0046982 ISS protein heterodimerization activity
GO:0071875 IEA adrenergic receptor signaling pathway
GO:0097195 IDA pilomotor reflex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276393 ADRA1A-003 protein_coding Homo_sapiens 0 1624
ENST00000354550 ADRA1A-002 protein_coding Homo_sapiens 0 1456
ENST00000380572 ADRA1A-005 protein_coding Homo_sapiens 0 1031
ENST00000380573 ADRA1A-008 protein_coding Homo_sapiens 0 1624
ENST00000380582 ADRA1A-001 protein_coding Homo_sapiens 0 1458
ENST00000380586 ADRA1A-004 protein_coding Homo_sapiens 0 1456
ENST00000518621 ADRA1A-011 processed_transcript Homo_sapiens 0 501
ENST00000519096 ADRA1A-007 nonsense_mediated_decay Homo_sapiens 0 1035
ENST00000519229 ADRA1A-009 protein_coding Homo_sapiens 0 1448
ENST00000521711 ADRA1A-006 nonsense_mediated_decay Homo_sapiens 0 1035

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