C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 89, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161368 Fam89b-003 ENSMUSG00000024939 10090 - 19:5728087-5729653 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryTestisENSMUST00000161368
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000161368 12.470±0.65 18.344±0.00 32.383±0.00 5.938±0.00 5.637±0.00 7.377±0.00 17.182±0.00 4.060±0.67 20.618±1.14 25.792±2.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001222 IDA transcription corepressor binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0030512 IDA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0060392 IDA negative regulation of SMAD protein import into nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316409 FAM89B-001 protein_coding Homo_sapiens 0 701

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