C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 248
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161519 Zfp248-002 ENSMUSG00000030145 10090 - 6:118428687-118455498 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverMuscleOvaryPlacentaENSMUST00000161519
Transcript ID Brain Breast Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000161519 0.636±0.00 0.209±0.00 0.171±0.00 0.183±0.03 0.216±0.00 0.109±0.02 0.833±0.08 0.843±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R3 CIL_0000R3_0002 CGP 6:118427319-118479320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270649 ZNF614-001 protein_coding Homo_sapiens 0.0000000002 73
ENST00000274599 ZNF300-201 protein_coding Homo_sapiens 6e-20 104
ENST00000289032 ZNF782-004 protein_coding Homo_sapiens 2e-23 115
ENST00000302851 ZNF561-001 protein_coding Homo_sapiens 0.00009 55
ENST00000326044 ZNF561-004 protein_coding Homo_sapiens 0.00004 55
ENST00000327668 ZNF84-001 protein_coding Homo_sapiens 8e-27 128
ENST00000333987 ZNF568-002 protein_coding Homo_sapiens 0.00000000000006 84
ENST00000334241 ZNF555-001 protein_coding Homo_sapiens 0.0000009 62
ENST00000357328 ZNF248-201 protein_coding Homo_sapiens 0 1256
ENST00000374648 ZNF248-005 protein_coding Homo_sapiens 0 303
ENST00000377073 ZNF157-001 protein_coding Homo_sapiens 9e-22 110
ENST00000392319 ZNF84-201 protein_coding Homo_sapiens 7e-27 128
ENST00000394226 ZNF300-001 protein_coding Homo_sapiens 6e-20 104
ENST00000395867 ZNF248-004 protein_coding Homo_sapiens 0 1256
ENST00000395873 ZNF248-002 protein_coding Homo_sapiens 0 298
ENST00000415168 ZNF568-005 protein_coding Homo_sapiens 0.00000000000009 84
ENST00000418587 ZNF300-202 protein_coding Homo_sapiens 6e-20 104
ENST00000424629 ZNF561-006 protein_coding Homo_sapiens 0.00008 55
ENST00000427179 ZNF300-002 protein_coding Homo_sapiens 7e-20 104
ENST00000432492 ZNF33AP1-001 processed_pseudogene Homo_sapiens 2e-17 95
ENST00000437590 ZNF487-003 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000446148 ZNF300-203 protein_coding Homo_sapiens 6e-20 104
ENST00000481138 ZNF782-001 protein_coding Homo_sapiens 3e-23 115
ENST00000485560 ZNF248-006 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000494133 ZNF248-003 processed_transcript Homo_sapiens 0 300
ENST00000535338 ZNF782-201 protein_coding Homo_sapiens 3e-23 115
ENST00000539354 ZNF84-002 protein_coding Homo_sapiens 3e-27 128
ENST00000543758 ZNF84-003 protein_coding Homo_sapiens 4e-27 128
ENST00000587857 ZNF568-013 protein_coding Homo_sapiens 0.00000000000004 84
ENST00000591539 ZNF555-003 protein_coding Homo_sapiens 0.0000002 62
ENST00000597606 CTD-2126E3.5-001 processed_pseudogene Homo_sapiens 2e-20 104
ENST00000602828 ZNF658B-002 transcribed_unprocessed_pseudogene Homo_sapiens 2e-35 156
ENST00000611278 ZNF248-202 protein_coding Homo_sapiens 0 303
ENST00000612867 ZNF658-001 protein_coding Homo_sapiens 9e-34 150
ENST00000615949 ZNF248-203 protein_coding Homo_sapiens 0 303
ENST00000615961 ZNF658B-001 processed_transcript Homo_sapiens 2e-35 156
ENST00000616085 ZNF568-201 protein_coding Homo_sapiens 0.00000000000008 84
ENST00000619231 ZNF568-203 protein_coding Homo_sapiens 0.00000000000009 84
ENST00000619925 ZNF658-005 protein_coding Homo_sapiens 0.0000002 62
ENST00000621410 ZNF658-201 protein_coding Homo_sapiens 9e-34 150
ENST00000622180 ZNF658-006 nonsense_mediated_decay Homo_sapiens 0.0000002 62

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