C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 7 superfamily member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161718 Tm7sf2-010 ENSMUSG00000024799 10090 - 19:6062978-6067808 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000161718
Transcript ID Breast
ENSMUST00000161718 15.556±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0043235 ISO receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279263 TM7SF2-001 protein_coding Homo_sapiens 0 654
ENST00000345348 TM7SF2-003 protein_coding Homo_sapiens 0 320
ENST00000524690 TM7SF2-013 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000524986 TM7SF2-023 protein_coding Homo_sapiens 1.96182e-44 183
ENST00000525385 TM7SF2-007 protein_coding Homo_sapiens 0 403
ENST00000526048 TM7SF2-016 retained_intron Homo_sapiens 0 320
ENST00000526085 TM7SF2-025 protein_coding Homo_sapiens 0 320
ENST00000526809 TM7SF2-024 protein_coding Homo_sapiens 0 444
ENST00000527851 TM7SF2-014 retained_intron Homo_sapiens 8e-34 148
ENST00000527968 TM7SF2-020 protein_coding Homo_sapiens 0 418
ENST00000528026 TM7SF2-012 retained_intron Homo_sapiens 1e-34 150
ENST00000528802 TM7SF2-018 protein_coding Homo_sapiens 0 551
ENST00000529233 TM7SF2-011 retained_intron Homo_sapiens 0 494
ENST00000529292 TM7SF2-002 nonsense_mediated_decay Homo_sapiens 0 721
ENST00000529601 TM7SF2-004 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000530650 TM7SF2-005 retained_intron Homo_sapiens 0 654
ENST00000531029 TM7SF2-021 processed_transcript Homo_sapiens 0 230
ENST00000531321 TM7SF2-008 protein_coding Homo_sapiens 0 551
ENST00000532328 TM7SF2-017 retained_intron Homo_sapiens 0 420
ENST00000533766 TM7SF2-010 retained_intron Homo_sapiens 0 265
ENST00000534371 TM7SF2-026 protein_coding Homo_sapiens 0 416

Loading