C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19, pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161787 Rps19-ps9-001 ENSMUSG00000068689 10090 - 6:87948464-87948877 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyTestisENSMUST00000161787
Transcript ID Adipose Kidney Testis
ENSMUST00000161787 0.131±0.00 0.130±0.00 0.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000310 CIL_000310_0002 CGP 6:87913935-87981637

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221975 RPS19-005 protein_coding Homo_sapiens 0 549
ENST00000405355 RP11-346C16.4-001 processed_pseudogene Homo_sapiens 0 425
ENST00000415286 RPS19P1-001 processed_pseudogene Homo_sapiens 0 475
ENST00000455650 RP11-445N18.3-001 processed_pseudogene Homo_sapiens 0 399
ENST00000457967 RP11-389O22.4-001 processed_pseudogene Homo_sapiens 0 355
ENST00000477321 RP11-289K10.1-001 processed_pseudogene Homo_sapiens 0 448
ENST00000480487 RPS19P3-001 processed_pseudogene Homo_sapiens 0 473
ENST00000593863 RPS19-006 protein_coding Homo_sapiens 0 549
ENST00000598261 RPS19-007 protein_coding Homo_sapiens 0 276
ENST00000598399 RPS19-008 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000598466 RPS19-004 retained_intron Homo_sapiens 0 196
ENST00000598742 RPS19-001 protein_coding Homo_sapiens 0 549
ENST00000600467 RPS19-002 protein_coding Homo_sapiens 0 257
ENST00000601492 RPS19-003 protein_coding Homo_sapiens 0 196

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