C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRIP and coiled-coil domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162041 Gcc2-002 ENSMUSG00000038039 10090 + 10:58255530-58305242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMuscleOvaryPlacentaTestisENSMUST00000162041
Transcript ID Brain Colon Muscle Ovary Placenta Testis
ENSMUST00000162041 13.796±0.00 1.085±0.00 0.839±0.00 3.851±2.74 2.221±2.19 8.204±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RA CIL_0007RA_0002 VISTA 10:58082278-58683620
CIL_00010T CIL_00010T_0002 CGP 10:58255497-58424691

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000016946 RGPD5-001 protein_coding Homo_sapiens 0 472
ENST00000302558 RGPD8-006 protein_coding Homo_sapiens 0 466
ENST00000304514 RGPD3-201 protein_coding Homo_sapiens 0 366
ENST00000309863 GCC2-014 protein_coding Homo_sapiens 0 4510
ENST00000329516 RGPD6-001 protein_coding Homo_sapiens 0 472
ENST00000393321 GCC2-004 nonsense_mediated_decay Homo_sapiens 0 889
ENST00000398146 RGPD2-001 protein_coding Homo_sapiens 0 355
ENST00000398193 RGPD1-201 protein_coding Homo_sapiens 0 355
ENST00000408999 RGPD4-001 protein_coding Homo_sapiens 0 455
ENST00000409750 RGPD8-001 protein_coding Homo_sapiens 0 466
ENST00000409776 RGPD1-202 protein_coding Homo_sapiens 0 355
ENST00000409821 GCC2-006 protein_coding Homo_sapiens 0 527
ENST00000409886 RGPD3-002 protein_coding Homo_sapiens 0 440
ENST00000409896 GCC2-003 protein_coding Homo_sapiens 0 2189
ENST00000428128 RGPD1-003 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000463822 RGPD6-006 retained_intron Homo_sapiens 0 483
ENST00000477523 RGPD5-007 retained_intron Homo_sapiens 0 483
ENST00000478207 GCC2-007 processed_transcript Homo_sapiens 2e-32 143
ENST00000480863 GCC2-010 retained_intron Homo_sapiens 0 503
ENST00000481729 GCC2-012 retained_intron Homo_sapiens 0 313
ENST00000482325 GCC2-001 nonsense_mediated_decay Homo_sapiens 0 4414
ENST00000559485 RGPD1-001 protein_coding Homo_sapiens 0 355
ENST00000614209 GCC2-201 protein_coding Homo_sapiens 0 1738

Loading