C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger with KRAB and SCAN domains 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162168 Zkscan5-004 ENSMUSG00000055991 10090 + 5:145207604-145218426 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TF CIL_0004TF_0002 CGP 5:145194946-145221750

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216187 FOXRED2-002 protein_coding Homo_sapiens 0.000002 60
ENST00000263966 USP13-001 protein_coding Homo_sapiens 0.0002 55
ENST00000295958 SMIM14-001 protein_coding Homo_sapiens 0.0000000003 73
ENST00000307720 PPID-001 protein_coding Homo_sapiens 0.00000002 66
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0.0003 53
ENST00000314442 P2RX4-013 retained_intron Homo_sapiens 0.0000001 64
ENST00000318336 FUT6-201 protein_coding Homo_sapiens 0.0000003 62
ENST00000321424 SIGLEC8-002 protein_coding Homo_sapiens 0.0000003 62
ENST00000326631 PLEKHJ1-201 protein_coding Homo_sapiens 0.0000000008 69
ENST00000326775 ZKSCAN5-005 protein_coding Homo_sapiens 0 193
ENST00000358067 ZNF329-201 protein_coding Homo_sapiens 0.000005 58
ENST00000382421 NOP2-001 protein_coding Homo_sapiens 0.0002 53
ENST00000394170 ZKSCAN5-001 protein_coding Homo_sapiens 0 193
ENST00000397224 FOXRED2-001 protein_coding Homo_sapiens 0.000002 60
ENST00000400580 NOP2-014 retained_intron Homo_sapiens 0.000000005 66
ENST00000451158 ZKSCAN5-004 protein_coding Homo_sapiens 0 193
ENST00000454175 ZKSCAN5-002 nonsense_mediated_decay Homo_sapiens 6e-22 111
ENST00000457483 XPO1-017 protein_coding Homo_sapiens 0.000002 57
ENST00000461254 DDX39B-004 retained_intron Homo_sapiens 0.0000004 62
ENST00000462256 DDX39B-004 retained_intron Homo_sapiens 0.0000004 62
ENST00000462954 DDX39B-005 retained_intron Homo_sapiens 0.0000006 62
ENST00000463727 PTPRE-001 retained_intron Homo_sapiens 0.000006 58
ENST00000465849 DDX39B-005 retained_intron Homo_sapiens 0.0000006 62
ENST00000467175 DDX39B-005 retained_intron Homo_sapiens 0.0000006 62
ENST00000471062 DDX39B-005 retained_intron Homo_sapiens 0.0000004 62
ENST00000473685 DDX39B-004 retained_intron Homo_sapiens 0.0000004 62
ENST00000475072 SON-010 retained_intron Homo_sapiens 0.0000002 60
ENST00000480242 SNRNP200-004 retained_intron Homo_sapiens 0.000001 60
ENST00000481245 CSF2RA-011 processed_transcript Homo_sapiens 0.00003 53
ENST00000481456 DDX39B-005 retained_intron Homo_sapiens 0.0000006 62
ENST00000482077 DDX39B-005 retained_intron Homo_sapiens 0.0000006 62
ENST00000485534 DDX39B-004 retained_intron Homo_sapiens 0.0000004 62
ENST00000485571 DDX39B-004 retained_intron Homo_sapiens 0.0000005 62
ENST00000487410 DDX39B-004 retained_intron Homo_sapiens 0.0000004 62
ENST00000489688 DDX39B-004 retained_intron Homo_sapiens 0.0000004 62
ENST00000494457 DDX39B-004 retained_intron Homo_sapiens 0.0000004 62
ENST00000494835 DDX39B-005 retained_intron Homo_sapiens 0.0000006 62
ENST00000496801 DDX39B-005 retained_intron Homo_sapiens 0.0000006 62
ENST00000511912 ETFDH-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000520855 DMGDH-007 processed_transcript Homo_sapiens 0.0000007 58
ENST00000523599 IKBKB-015 retained_intron Homo_sapiens 0.00000000002 75
ENST00000523721 PEX16-010 processed_transcript Homo_sapiens 0.0000004 58
ENST00000524754 FUT6-003 protein_coding Homo_sapiens 0.0000003 62
ENST00000527106 FUT6-002 protein_coding Homo_sapiens 0.0000002 62
ENST00000527293 ZNF707-019 nonsense_mediated_decay Homo_sapiens 0.0000008 58
ENST00000533626 EIF3F-001 protein_coding Homo_sapiens 0.0000002 64
ENST00000549982 MRPL42-001 protein_coding Homo_sapiens 0.0003 55
ENST00000569584 TERF2-011 protein_coding Homo_sapiens 0.0002 53
ENST00000577600 CNDP2-017 protein_coding Homo_sapiens 0.0000002 60
ENST00000580229 CNDP2-015 processed_transcript Homo_sapiens 0.0000002 60
ENST00000586608 PLEKHJ1-007 protein_coding Homo_sapiens 0.0000000006 69
ENST00000587962 PLEKHJ1-011 protein_coding Homo_sapiens 0.0000000008 69
ENST00000588450 PLEKHJ1-003 retained_intron Homo_sapiens 0.000000002 69
ENST00000588545 PLEKHJ1-006 retained_intron Homo_sapiens 0.0000000006 69
ENST00000588633 PLEKHJ1-010 processed_transcript Homo_sapiens 0.0000000002 69
ENST00000589097 PLEKHJ1-001 protein_coding Homo_sapiens 0.000000001 69
ENST00000589791 PLEKHJ1-002 processed_transcript Homo_sapiens 0.0000000009 69
ENST00000591099 PLEKHJ1-008 protein_coding Homo_sapiens 0.0000000007 69
ENST00000596148 TRAPPC5-001 protein_coding Homo_sapiens 0.0000006 62
ENST00000597186 ZNF329-003 protein_coding Homo_sapiens 0.000006 58
ENST00000598312 ZNF329-001 protein_coding Homo_sapiens 0.000005 58
ENST00000602976 OGG1-017 retained_intron Homo_sapiens 0.000007 58
ENST00000608958 SETD7-009 protein_coding Homo_sapiens 0.0001 55
ENST00000614813 TCF25-027 protein_coding Homo_sapiens 0.0000002 62
ENST00000619929 PLCD3-001 protein_coding Homo_sapiens 0.0004 53
ENST00000620535 NOP2-203 protein_coding Homo_sapiens 0.0002 53

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