C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162882 Pde8b-006 ENSMUSG00000021684 10090 - 13:95025330-95046066 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000162882
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000162882 0.342±0.26 0.247±0.00 0.559±0.13 1.702±0.21 0.638±0.00 1.071±0.00 0.156±0.05 0.140±0.00 2.904±0.00 0.132±0.00 0.378±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DK CIL_0008DK_0002 VISTA 13:94516164-95118068
CIL_00091A CIL_00091A_0002 VISTA 13:94568895-95169433
CIL_000979 CIL_000979_0002 VISTA 13:94573844-95174877
CIL_0000CH CIL_0000CH_0002 CGP 13:94976344-95250336

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264917 PDE8B-001 protein_coding Homo_sapiens 0 1519
ENST00000310298 PDE8A-001 protein_coding Homo_sapiens 0 398
ENST00000333194 PDE8B-005 protein_coding Homo_sapiens 0 1502
ENST00000339708 PDE8A-002 protein_coding Homo_sapiens 0 398
ENST00000340978 PDE8B-002 protein_coding Homo_sapiens 0 1519
ENST00000342343 PDE8B-004 protein_coding Homo_sapiens 0 1498
ENST00000346042 PDE8B-003 protein_coding Homo_sapiens 0 1519
ENST00000394553 PDE8A-201 protein_coding Homo_sapiens 0 398
ENST00000478717 PDE8A-003 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000485596 PDE8A-004 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000505283 PDE8B-006 protein_coding Homo_sapiens 0 1524
ENST00000557957 PDE8A-005 protein_coding Homo_sapiens 0 398
ENST00000559742 PDE8A-006 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000560789 PDE8A-007 retained_intron Homo_sapiens 0 398
ENST00000561024 PDE8A-008 retained_intron Homo_sapiens 0 348

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