C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163125 Med16-002 ENSMUSG00000013833 10090 - 10:79901838-79908818 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000163125
Transcript ID Testis
ENSMUST00000163125 1.397±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0000HX CIL_0000HX_0002 CGP 10:79890853-79908923
CIL_00011Z CIL_00011Z_0002 CGP 10:79894708-79917006

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269814 MED16-201 protein_coding Homo_sapiens 0 505
ENST00000312090 MED16-003 protein_coding Homo_sapiens 0 1083
ENST00000325464 MED16-202 protein_coding Homo_sapiens 0 1083
ENST00000395808 MED16-001 protein_coding Homo_sapiens 0 1083
ENST00000586017 MED16-011 protein_coding Homo_sapiens 0 449
ENST00000589119 MED16-006 protein_coding Homo_sapiens 0 1083
ENST00000592373 MED16-020 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000592943 MED16-005 protein_coding Homo_sapiens 0 1083
ENST00000606248 MED16-023 nonsense_mediated_decay Homo_sapiens 0 1083
ENST00000606828 MED16-002 protein_coding Homo_sapiens 0 453
ENST00000616387 MED16-203 protein_coding Homo_sapiens 0 665

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