C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 small nuclear RNA auxiliary factor 1-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163330 U2af1l4-033 ENSMUSG00000078765 10090 + 7:30563879-30565179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000163330
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000163330 17.137±4.43 24.863±7.08 16.978±1.24 24.463±1.76 28.994±5.85 24.537±9.47 14.424±3.65 16.967±2.69 13.039±5.06 23.913±5.02 31.065±4.46 12.514±3.31 19.435±0.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292879 U2AF1L4-005 protein_coding Homo_sapiens 0 252
ENST00000378975 U2AF1L4-006 protein_coding Homo_sapiens 0 486
ENST00000412391 U2AF1L4-201 protein_coding Homo_sapiens 0 654
ENST00000585554 U2AF1L4-008 retained_intron Homo_sapiens 0 252
ENST00000585771 U2AF1L4-017 retained_intron Homo_sapiens 1e-29 134
ENST00000586476 U2AF1L4-001 retained_intron Homo_sapiens 0 252
ENST00000587886 U2AF1L4-015 protein_coding Homo_sapiens 2e-29 132
ENST00000587987 U2AF1L4-007 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000588892 U2AF1L4-003 retained_intron Homo_sapiens 6e-29 134
ENST00000588980 U2AF1L4-004 retained_intron Homo_sapiens 5e-29 134
ENST00000589429 U2AF1L4-011 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000589807 AD000671.6-001 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000590135 U2AF1L4-009 retained_intron Homo_sapiens 2e-21 108
ENST00000591057 U2AF1L4-012 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000591084 U2AF1L4-010 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000591855 U2AF1L4-013 retained_intron Homo_sapiens 0 486
ENST00000592913 U2AF1L4-002 retained_intron Homo_sapiens 8e-29 132
ENST00000594792 U2AF1L4-019 nonsense_mediated_decay Homo_sapiens 0 483
ENST00000600296 U2AF1L4-021 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000601236 U2AF1L4-020 nonsense_mediated_decay Homo_sapiens 0 248

Loading