C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: receptor (TNFRSF)-interacting serine-threonine kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163418 Ripk1-003 ENSMUSG00000021408 10090 + 13:34002400-34014686 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryENSMUST00000163418
Transcript ID Adrenal Breast Colon Lung Ovary
ENSMUST00000163418 24.139±5.50 16.933±0.00 17.522±3.75 13.521±1.97 16.395±3.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0002 VISTA 13:33848088-34450616
CIL_000160 CIL_000160_000L CGP 13:33879816-34002794
CIL_00038C CIL_00038C_0002 CGP 13:33917918-34002794
CIL_000823 CIL_000823_0002 VISTA 13:33947185-34549843
CIL_00038F CIL_00038F_0002 CGP 13:33964659-34035170
CIL_00038E CIL_00038E_0002 CGP 13:34002363-34074074

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259808 RIPK1-005 protein_coding Homo_sapiens 0 449
ENST00000380409 RIPK1-201 protein_coding Homo_sapiens 0 444
ENST00000479389 RIPK1-004 processed_transcript Homo_sapiens 0 320

Loading