C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | poly (A) polymerase alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000163473  |
Papola-009 |
ENSMUSG00000021111 |
10090 | + |
12:105784716-105837131  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003HI | CIL_0003HI_0002 | CGP | 12:105705982-105838944 |
| CIL_0003HJ | CIL_0003HJ_0002 | CGP | 12:105784694-106077410 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000398 | IBA | mRNA splicing, via spliceosome |
| GO:0003723 | IEA | RNA binding |
| GO:0004652 | IDA | polynucleotide adenylyltransferase activity |
| GO:0005634 | IBA | nucleus |
| GO:0005737 | IBA | cytoplasm |
| GO:0006369 | IBA | termination of RNA polymerase II transcription |
| GO:0006378 | IBA | mRNA polyadenylation |
| GO:0043631 | IDA | RNA polyadenylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000216277
|
PAPOLA-001 | protein_coding | Homo_sapiens | 0 | 3134 |
|
ENST00000392990
|
PAPOLA-005 | protein_coding | Homo_sapiens | 0 | 2985 |
|
ENST00000404991
|
PAPOLB-001 | protein_coding | Homo_sapiens | 0 | 2025 |
|
ENST00000553357
|
PAPOLA-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 555 |
|
ENST00000553461
|
PAPOLA-025 | protein_coding | Homo_sapiens | 0 | 944 |
|
ENST00000553689
|
PAPOLA-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 2193 |
|
ENST00000553940
|
PAPOLA-021 | retained_intron | Homo_sapiens | 9.94922e-44 | 180 |
|
ENST00000554130
|
PAPOLA-012 | processed_transcript | Homo_sapiens | 0 | 532 |
|
ENST00000554135
|
PAPOLA-019 | retained_intron | Homo_sapiens | 0 | 361 |
|
ENST00000554666
|
PAPOLA-026 | retained_intron | Homo_sapiens | 0 | 713 |
|
ENST00000554887
|
PAPOLA-010 | processed_transcript | Homo_sapiens | 0 | 571 |
|
ENST00000555021
|
PAPOLA-016 | retained_intron | Homo_sapiens | 0 | 353 |
|
ENST00000555131
|
PAPOLA-015 | retained_intron | Homo_sapiens | 0 | 501 |
|
ENST00000555224
|
PAPOLA-024 | retained_intron | Homo_sapiens | 0 | 649 |
|
ENST00000555508
|
PAPOLA-022 | retained_intron | Homo_sapiens | 0 | 241 |
|
ENST00000555626
|
PAPOLA-006 | protein_coding | Homo_sapiens | 0 | 2905 |
|
ENST00000555701
|
PAPOLA-009 | retained_intron | Homo_sapiens | 0 | 355 |
|
ENST00000555912
|
PAPOLA-007 | retained_intron | Homo_sapiens | 0 | 244 |
|
ENST00000556248
|
PAPOLA-014 | processed_transcript | Homo_sapiens | 0 | 335 |
|
ENST00000556283
|
PAPOLA-018 | retained_intron | Homo_sapiens | 0 | 846 |
|
ENST00000556459
|
PAPOLA-020 | protein_coding | Homo_sapiens | 0 | 909 |
|
ENST00000556619
|
PAPOLA-013 | protein_coding | Homo_sapiens | 0 | 483 |
|
ENST00000556787
|
PAPOLA-017 | retained_intron | Homo_sapiens | 0 | 658 |
|
ENST00000557320
|
PAPOLA-002 | protein_coding | Homo_sapiens | 0 | 1500 |
|
ENST00000557406
|
PAPOLA-023 | retained_intron | Homo_sapiens | 0 | 244 |
|
ENST00000557471
|
PAPOLA-004 | protein_coding | Homo_sapiens | 0 | 1022 |
