C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing Tcp1, subunit 3 (gamma)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163735 Cct3-007 ENSMUSG00000001416 10090 + 3:88302838-88320650 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000163735
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000163735 9.744±1.64 66.397±0.00 68.842±42.30 170.346±95.69 84.894±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295688 CCT3-001 protein_coding Homo_sapiens 0 795
ENST00000368258 CCT3-015 nonsense_mediated_decay Homo_sapiens 0 795
ENST00000368259 CCT3-017 protein_coding Homo_sapiens 0 795
ENST00000368261 CCT3-010 processed_transcript Homo_sapiens 0 335
ENST00000368262 CCT3-016 nonsense_mediated_decay Homo_sapiens 0 795
ENST00000413555 CCT3-014 protein_coding Homo_sapiens 0 383
ENST00000415548 CCT3-011 protein_coding Homo_sapiens 1e-34 150
ENST00000446905 CCT3-013 protein_coding Homo_sapiens 0 379
ENST00000463132 CCT3-012 processed_transcript Homo_sapiens 0 381
ENST00000472765 CCT3-004 protein_coding Homo_sapiens 0 795
ENST00000478640 CCT3-019 protein_coding Homo_sapiens 0 298
ENST00000490221 CCT3-006 retained_intron Homo_sapiens 0 379
ENST00000496684 CCT3-021 protein_coding Homo_sapiens 0 374
ENST00000533194 CCT3-020 protein_coding Homo_sapiens 0 383

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