C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA C130050O18 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164078 C130050O18Rik-003 ENSMUSG00000044092 10090 + 5:139406465-139415623 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000164078
Transcript ID Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164078 0.101±0.03 0.194±0.04 0.134±0.06 0.067±0.00 0.062±0.03 0.264±0.00 0.035±0.00 0.163±0.09 0.051±0.03 0.078±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_0000ZU CIL_0000ZU_0002 CGP 5:139352617-139460502
CIL_0000ZR CIL_0000ZR_0002 CGP 5:139359739-139460502

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

No Homologs available.

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