C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: src-like adaptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164163 Sla-001 ENSMUSG00000022372 10090 - 15:66780819-66831646 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164163
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164163 1.209±0.67 1.188±0.19 0.652±0.03 1.836±1.15 3.311±0.65 0.477±0.17 0.341±0.15 0.550±0.35 1.929±1.80 4.528±0.21 0.127±0.00 0.779±0.45 0.365±0.02 0.094±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009D4 CIL_0009D4_0002 VISTA 15:66524301-67127162
CIL_0004PY CIL_0004PY_0002 CGP 15:66577572-66850721
CIL_0004PV CIL_0004PV_0002 CGP 15:66670753-66850721
CIL_0003DW CIL_0003DW_0003 CGP 15:66780819-66923201

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338087 SLA-003 protein_coding Homo_sapiens 0 680
ENST00000395352 SLA-001 protein_coding Homo_sapiens 0 680
ENST00000427060 SLA-010 protein_coding Homo_sapiens 0 680
ENST00000517648 SLA-004 protein_coding Homo_sapiens 0 355
ENST00000518565 SLA-002 processed_transcript Homo_sapiens 0 246
ENST00000519341 SLA-015 protein_coding Homo_sapiens 0 279
ENST00000520106 SLA-006 retained_intron Homo_sapiens 0 246
ENST00000521823 SLA-019 processed_transcript Homo_sapiens 0 311
ENST00000522002 SLA-009 processed_transcript Homo_sapiens 0 246
ENST00000522119 SLA-013 protein_coding Homo_sapiens 0 499
ENST00000522432 SLA-022 nonsense_mediated_decay Homo_sapiens 1.99965e-42 176
ENST00000523224 SLA-008 retained_intron Homo_sapiens 0 359
ENST00000524345 SLA-005 protein_coding Homo_sapiens 0 649

Loading