C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATH1, acid trehalase-like 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164337 Athl1-002 ENSMUSG00000062031 10090 + 7:140941391-140947656 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENSMUST00000164337
Transcript ID Muscle Placenta
ENSMUST00000164337 0.248±0.00 0.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B4 CIL_0002B4_0002 CGP 7:140920902-140947664
CIL_0002B6 CIL_0002B6_0002 CGP 7:140941391-140950239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0005975 IEA carbohydrate metabolic process
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397660 ATHL1-008 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000409479 ATHL1-002 protein_coding Homo_sapiens 0 754
ENST00000409548 ATHL1-004 protein_coding Homo_sapiens 0 977
ENST00000409655 ATHL1-001 protein_coding Homo_sapiens 0 782
ENST00000474221 ATHL1-003 retained_intron Homo_sapiens 0 383
ENST00000476372 ATHL1-005 retained_intron Homo_sapiens 0 433
ENST00000482937 ATHL1-007 nonsense_mediated_decay Homo_sapiens 0 257

Loading