C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 4430402I18 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164777 4430402I18Rik-006 ENSMUSG00000064202 10090 - 19:28923688-28963587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000164777
Transcript ID Muscle
ENSMUST00000164777 0.886±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0002 CGP 19:28258851-28913960
CIL_0000NJ CIL_0000NJ_0002 CGP 19:28835049-28967800
CIL_0000NK CIL_0000NK_0002 CGP 19:28893042-28967800

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223517 SPATA6L-004 processed_transcript Homo_sapiens 0 283
ENST00000381890 SPATA6L-012 protein_coding Homo_sapiens 0 189
ENST00000406861 SPATA6L-010 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000451763 SPATA6L-011 retained_intron Homo_sapiens 7.00649e-45 187
ENST00000461761 SPATA6L-002 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000475086 SPATA6L-009 protein_coding Homo_sapiens 0 285
ENST00000485616 SPATA6L-001 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000486047 SPATA6L-008 nonsense_mediated_decay Homo_sapiens 2.8026e-45 187
ENST00000496798 SPATA6L-016 processed_transcript Homo_sapiens 1.4013e-45 187

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