C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rab40C, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164982 Rab40c-004 ENSMUSG00000025730 10090 - 17:25883628-25919506 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218249 RAB40AL-001 protein_coding Homo_sapiens 0 217
ENST00000248139 RAB40C-001 protein_coding Homo_sapiens 0 603
ENST00000269347 RAB40B-002 protein_coding Homo_sapiens 2e-28 132
ENST00000304236 RAB40A-001 protein_coding Homo_sapiens 0 228
ENST00000372633 RAB40A-002 protein_coding Homo_sapiens 0 228
ENST00000509637 RAB40C-006 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000535977 RAB40C-201 protein_coding Homo_sapiens 0 603
ENST00000538492 RAB40C-202 protein_coding Homo_sapiens 0 603
ENST00000538809 RAB40B-005 protein_coding Homo_sapiens 0 285
ENST00000539661 RAB40C-203 protein_coding Homo_sapiens 0 603
ENST00000561781 RAB40C-002 retained_intron Homo_sapiens 0 603
ENST00000563109 RAB40C-003 protein_coding Homo_sapiens 0 939
ENST00000564703 RAB40C-005 protein_coding Homo_sapiens 0 224
ENST00000565511 RAB40C-004 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000566290 RAB40C-008 protein_coding Homo_sapiens 0 446
ENST00000568586 RAB40C-009 protein_coding Homo_sapiens 0 446
ENST00000569575 RAB40C-007 protein_coding Homo_sapiens 0 446
ENST00000571995 RAB40B-001 protein_coding Homo_sapiens 0 281
ENST00000572603 RAB40B-006 processed_transcript Homo_sapiens 1.99993e-41 172

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