C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth factor independent 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165344 Gfi1-202 ENSMUSG00000029275 10090 - 5:107717224-107723961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000165344
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000165344 0.133±0.08 0.030±0.00 0.067±0.01 0.055±0.00 0.203±0.10 1.509±0.00 0.039±0.02 0.085±0.02 0.340±0.25 0.162±0.13 0.051±0.00 0.408±0.00 0.353±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZO CIL_0005ZO_0002 CGP 5:107597373-107726036
CIL_0007C9 CIL_0007C9_0003 CGP 5:107716657-107875107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007638 IMP mechanosensory behavior
GO:0008270 IEA zinc ion binding
GO:0009996 IMP negative regulation of cell fate specification
GO:0042472 IMP inner ear morphogenesis
GO:0042491 IMP auditory receptor cell differentiation
GO:0042660 IMP positive regulation of cell fate specification
GO:0045165 IMP cell fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294702 GFI1-002 protein_coding Homo_sapiens 0 669
ENST00000370332 GFI1-001 protein_coding Homo_sapiens 0 669
ENST00000427103 GFI1-201 protein_coding Homo_sapiens 0 669

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