C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 148
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165418 Zfp148-202 ENSMUSG00000022811 10090 + 16:33380775-33503903 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165418 3.234±0.92 2.510±0.80 3.951±0.16 4.544±2.40 3.007±1.19 2.531±0.34 1.558±0.43 2.797±0.19 2.067±0.32 3.759±0.30 0.814±0.24 4.208±1.62 2.169±0.95 0.775±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004V6 CIL_0004V6_0002 CGP 16:33251456-33503903
CIL_0004UH CIL_0004UH_0002 CGP 16:33380775-33664135

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0003677 IDA DNA binding
GO:0003690 IEA double-stranded DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006461 IEA protein complex assembly
GO:0007276 IMP gamete generation
GO:0010629 IEA negative regulation of gene expression
GO:0021762 IEA substantia nigra development
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360647 ZNF148-001 protein_coding Homo_sapiens 0 6174
ENST00000465763 ZNF148-007 protein_coding Homo_sapiens 0 597
ENST00000468369 ZNF148-003 protein_coding Homo_sapiens 0 837
ENST00000471196 ZNF148-009 protein_coding Homo_sapiens 0 337
ENST00000484491 ZNF148-004 protein_coding Homo_sapiens 0 3855
ENST00000485866 ZNF148-002 protein_coding Homo_sapiens 0 3542
ENST00000492394 ZNF148-005 protein_coding Homo_sapiens 0 3971
ENST00000495019 ZNF148-008 protein_coding Homo_sapiens 0 562
ENST00000497929 ZNF148-006 processed_transcript Homo_sapiens 0 2992
ENST00000544464 ZNF148-201 protein_coding Homo_sapiens 0 3241

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