C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO/sentrin specific peptidase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165607 Senp6-006 ENSMUSG00000034252 10090 + 9:80067493-80143906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000165607
Transcript ID Adipose Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000165607 1.877±0.14 3.605±1.31 8.566±6.56 0.697±0.11 0.795±0.19 2.469±0.67 3.357±0.56 22.786±6.74 11.772±7.10 6.090±4.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PT CIL_0006PT_0002 CGP 9:79815051-80144953
CIL_0006PS CIL_0006PS_0002 CGP 9:80066903-80311729

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0006508 IEA proteolysis
GO:0008234 IEA cysteine-type peptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327284 SENP6-010 protein_coding Homo_sapiens 0 1306
ENST00000370010 SENP6-002 protein_coding Homo_sapiens 0 2684
ENST00000424947 SENP6-007 protein_coding Homo_sapiens 0 1306
ENST00000447266 SENP6-004 protein_coding Homo_sapiens 0 2684
ENST00000474906 SENP6-009 retained_intron Homo_sapiens 0 520
ENST00000476060 SENP6-008 retained_intron Homo_sapiens 0 315
ENST00000483859 SENP6-003 protein_coding Homo_sapiens 0 641
ENST00000487548 SENP6-005 retained_intron Homo_sapiens 2e-37 159
ENST00000493959 SENP6-001 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000503501 SENP6-011 nonsense_mediated_decay Homo_sapiens 0 1267

Loading