| Transcript ID | Ovary | Placenta | Testis |
|---|---|---|---|
| ENSMUST00000165724 | 100.600±0.00 | 60.461±30.23 | 12.852±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | polypyrimidine tract binding protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000165724  |
Ptbp1-017 |
ENSMUSG00000006498 |
10090 | + |
10:79859650-79863053  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008XG | CIL_0008XG_0002 | VISTA | 10:79539861-80142369 |
| CIL_00051Q | CIL_00051Q_0002 | CGP | 10:79821021-79864771 |
| CIL_00008B | CIL_00008B_0002 | CGP | 10:79854427-79874634 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0048025 | IMP | negative regulation of mRNA splicing, via spliceosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000017668
|
ptbp1a-001 | protein_coding | Danio_rerio | 7.00649e-44 | 182 |
|
ENST00000349038
|
PTBP1-003 | protein_coding | Homo_sapiens | 0 | 460 |
|
ENST00000350092
|
PTBP1-019 | protein_coding | Homo_sapiens | 0 | 479 |
|
ENST00000356948
|
PTBP1-001 | protein_coding | Homo_sapiens | 0 | 479 |
|
ENST00000394601
|
PTBP1-002 | protein_coding | Homo_sapiens | 0 | 460 |
|
ENST00000554374
|
PTBP1P-001 | processed_pseudogene | Homo_sapiens | 0 | 385 |
|
ENST00000585856
|
PTBP1-007 | retained_intron | Homo_sapiens | 0 | 462 |
|
ENST00000585932
|
PTBP1-014 | nonsense_mediated_decay | Homo_sapiens | 0 | 723 |
|
ENST00000585956
|
PTBP1-016 | protein_coding | Homo_sapiens | 0 | 614 |
|
ENST00000586944
|
PTBP1-004 | retained_intron | Homo_sapiens | 0 | 460 |
|
ENST00000587136
|
PTBP1-008 | retained_intron | Homo_sapiens | 0 | 211 |
|
ENST00000587191
|
PTBP1-017 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000592113
|
PTBP1-018 | retained_intron | Homo_sapiens | 0 | 303 |
|
ENST00000592804
|
PTBP1-010 | retained_intron | Homo_sapiens | 0 | 339 |
|
ENST00000621737
|
PTBP1-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 544 |
