| Transcript ID | Brain | Testis |
|---|---|---|
| ENSMUST00000165898 | 5.550±0.91 | 12.103±6.35 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000165898  |
Sema4a-201 |
ENSMUSG00000028064 |
10090 | - |
3:88435962-88459101  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008JO | CIL_0008JO_0002 | VISTA | 3:87838105-88441065 |
| CIL_0008P5 | CIL_0008P5_0002 | VISTA | 3:88218217-88823366 |
| CIL_000898 | CIL_000898_0002 | VISTA | 3:88224783-88827970 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001525 | IEA | angiogenesis |
| GO:0002292 | IMP | T cell differentiation involved in immune response |
| GO:0004872 | IEA | receptor activity |
| GO:0005886 | IEA | plasma membrane |
| GO:0007409 | IMP | axonogenesis |
| GO:0008360 | IDA | regulation of cell shape |
| GO:0010594 | IMP | regulation of endothelial cell migration |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016525 | IMP | negative regulation of angiogenesis |
| GO:0045063 | IMP | T-helper 1 cell differentiation |
| GO:0071526 | IMP | semaphorin-plexin signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000355014
|
SEMA4A-002 | protein_coding | Homo_sapiens | 0 | 2239 |
|
ENST00000368282
|
SEMA4A-003 | protein_coding | Homo_sapiens | 0 | 2193 |
|
ENST00000368284
|
SEMA4A-004 | protein_coding | Homo_sapiens | 0 | 1768 |
|
ENST00000368285
|
SEMA4A-001 | protein_coding | Homo_sapiens | 0 | 2193 |
|
ENST00000368286
|
SEMA4A-201 | protein_coding | Homo_sapiens | 0 | 2145 |
|
ENST00000414683
|
SEMA4A-007 | protein_coding | Homo_sapiens | 0 | 926 |
|
ENST00000435124
|
SEMA4A-015 | protein_coding | Homo_sapiens | 0 | 1002 |
|
ENST00000438830
|
SEMA4A-013 | protein_coding | Homo_sapiens | 0 | 381 |
|
ENST00000462892
|
SEMA4A-011 | retained_intron | Homo_sapiens | 0 | 905 |
|
ENST00000466698
|
SEMA4A-009 | retained_intron | Homo_sapiens | 0 | 366 |
|
ENST00000469065
|
SEMA4A-010 | retained_intron | Homo_sapiens | 0 | 449 |
|
ENST00000470306
|
SEMA4A-005 | retained_intron | Homo_sapiens | 0 | 357 |
|
ENST00000487358
|
SEMA4A-006 | processed_transcript | Homo_sapiens | 0 | 1225 |
