C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166075 Arf4-003 ENSMUSG00000021877 10090 + 14:26638226-26656801 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000166075
Transcript ID Adipose Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000166075 44.824±0.00 33.088±0.00 15.860±0.00 21.381±0.00 8.343±0.00 23.545±7.96 5.792±0.91 36.829±17.52 76.555±26.65 27.034±5.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074S CIL_00074S_0002 CGP 14:26638074-26669883

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 TAS GTP binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0015031 TAS protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000053775 arf3b-001 protein_coding Danio_rerio 3e-30 137
ENST00000303436 ARF4-001 protein_coding Homo_sapiens 0 1291
ENST00000439608 ARF4P4-001 processed_pseudogene Homo_sapiens 0 337
ENST00000463880 ARF4-006 protein_coding Homo_sapiens 0 355
ENST00000483848 ARF4-005 processed_transcript Homo_sapiens 0 241
ENST00000486310 ARF4-002 nonsense_mediated_decay Homo_sapiens 0 1530
ENST00000488156 ARF4-009 protein_coding Homo_sapiens 8e-23 111
ENST00000489843 ARF4-003 protein_coding Homo_sapiens 0 1099
ENST00000493378 ARF4-008 processed_transcript Homo_sapiens 0 241
ENST00000495354 ARF4-007 processed_transcript Homo_sapiens 4e-24 115
ENST00000496292 ARF4-004 protein_coding Homo_sapiens 0 1291
ENST00000605447 RP11-349K21.1-001 processed_pseudogene Homo_sapiens 0 523

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