C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166214 Wdr36-202 ENSMUSG00000038299 10090 + 18:32837225-32866350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166214
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166214 8.581±1.86 6.797±2.19 3.633±2.26 4.113±1.62 8.304±1.51 3.830±2.68 4.038±0.74 5.131±1.00 5.445±1.49 5.920±1.27 2.956±0.36 11.482±4.34 9.609±4.71 3.760±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V0 CIL_0007V0_0002 VISTA 18:32241944-32843241
CIL_0004UR CIL_0004UR_0002 CGP 18:32815383-32866420
CIL_0004UQ CIL_0004UQ_0002 CGP 18:32837225-33195767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001895 IMP retina homeostasis
GO:0005575 ND cellular_component
GO:0006364 IEA rRNA processing
GO:0030516 IMP regulation of axon extension
GO:0032040 IEA small-subunit processome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000505303 WDR36-007 retained_intron Homo_sapiens 0 2045
ENST00000506538 WDR36-001 protein_coding Homo_sapiens 0 2961
ENST00000513710 WDR36-010 protein_coding Homo_sapiens 0 2961
ENST00000515784 WDR36-003 retained_intron Homo_sapiens 0 239
ENST00000612402 WDR36-201 protein_coding Homo_sapiens 0 2961

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