C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CLIP associating protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166734 Clasp2-203 ENSMUSG00000033392 10090 + 9:113812586-113919697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000166734
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000166734 4.769±0.53 8.801±2.53 15.259±0.40 2.389±1.33 0.801±0.30 1.393±0.55 4.068±0.28 1.150±0.87 2.780±0.00 8.937±6.21 1.332±0.89 0.379±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DD CIL_0003DD_0002 CGP 9:113812586-113977199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0005874 IEA microtubule
GO:0005881 IDA cytoplasmic microtubule
GO:0007026 IDA negative regulation of microtubule depolymerization
GO:0007163 IMP establishment or maintenance of cell polarity
GO:0008017 IDA microtubule binding
GO:0016477 IMP cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102445 clasp1a-201 protein_coding Danio_rerio 0 448
ENST00000313350 CLASP2-007 protein_coding Homo_sapiens 0 1840
ENST00000333778 CLASP2-008 protein_coding Homo_sapiens 0 1602
ENST00000359576 CLASP2-201 protein_coding Homo_sapiens 0 6172
ENST00000399362 CLASP2-002 protein_coding Homo_sapiens 0 6167
ENST00000461133 CLASP2-010 protein_coding Homo_sapiens 0 5446
ENST00000464961 CLASP2-009 retained_intron Homo_sapiens 0 1417
ENST00000468888 CLASP2-001 protein_coding Homo_sapiens 0 6154
ENST00000475576 CLASP2-023 protein_coding Homo_sapiens 0 420
ENST00000476251 CLASP2-017 nonsense_mediated_decay Homo_sapiens 0 712
ENST00000476433 CLASP2-016 processed_transcript Homo_sapiens 0 595
ENST00000480013 CLASP2-003 protein_coding Homo_sapiens 0 3947
ENST00000480385 CLASP2-021 protein_coding Homo_sapiens 0 595
ENST00000482896 CLASP2-013 processed_transcript Homo_sapiens 0 556
ENST00000485378 CLASP2-025 protein_coding Homo_sapiens 0 1120
ENST00000486796 CLASP2-015 retained_intron Homo_sapiens 0 211
ENST00000487200 CLASP2-006 protein_coding Homo_sapiens 0 1838
ENST00000487553 CLASP2-018 protein_coding Homo_sapiens 0 628
ENST00000491045 CLASP2-022 retained_intron Homo_sapiens 0 453
ENST00000494261 CLASP2-019 retained_intron Homo_sapiens 0 617
ENST00000496954 CLASP2-024 protein_coding Homo_sapiens 0 667
ENST00000498331 CLASP2-014 processed_transcript Homo_sapiens 0 453

Loading