C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167256 Taf9-201 ENSMUSG00000052293 10090 + 13:100651607-100656059 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000167256
Transcript ID Ovary Testis
ENSMUST00000167256 2.950±0.00 152.240±28.92

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005634 IDA nucleus
GO:0005669 ISO transcription factor TFIID complex
GO:0006352 IEA DNA-templated transcription, initiation
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217893 AK6-003 protein_coding Homo_sapiens 0 1243
ENST00000328663 AK6-201 protein_coding Homo_sapiens 0 1243
ENST00000380818 TAF9-004 protein_coding Homo_sapiens 3e-28 130
ENST00000380822 TAF9-001 protein_coding Homo_sapiens 5e-28 130
ENST00000502819 TAF9-010 protein_coding Homo_sapiens 2e-28 130
ENST00000503245 AK6-005 protein_coding Homo_sapiens 0 979
ENST00000504109 AK6-002 protein_coding Homo_sapiens 0 763
ENST00000506736 AK6-001 protein_coding Homo_sapiens 0 1243
ENST00000508954 AK6-007 protein_coding Homo_sapiens 0 621
ENST00000509462 AK6-006 protein_coding Homo_sapiens 0 870
ENST00000512152 AK6-004 protein_coding Homo_sapiens 0 726
ENST00000540219 RP13-7D7.1-001 processed_pseudogene Homo_sapiens 3e-20 102
ENST00000547218 RP11-361A23.3-001 processed_pseudogene Homo_sapiens 0 529
ENST00000549020 RP11-297L6.2-001 processed_pseudogene Homo_sapiens 1e-23 113
ENST00000585464 TAF9P3-001 processed_pseudogene Homo_sapiens 5e-27 122
ENST00000587506 CTC-448F2.6-001 processed_pseudogene Homo_sapiens 0 863
ENST00000612207 TAF9-001 protein_coding Homo_sapiens 5e-28 130
ENST00000615404 AK6-202 protein_coding Homo_sapiens 0 1243
ENST00000616112 AK6-005 protein_coding Homo_sapiens 0 763
ENST00000616867 AK6-001 protein_coding Homo_sapiens 0 1243
ENST00000617775 AK6-004 protein_coding Homo_sapiens 0 870
ENST00000617893 AK6-002 protein_coding Homo_sapiens 0 1243
ENST00000618233 TAF9-010 protein_coding Homo_sapiens 2e-28 130
ENST00000618980 TAF9-012 protein_coding Homo_sapiens 1e-28 130
ENST00000620269 TAF9-004 protein_coding Homo_sapiens 3e-28 130
ENST00000620800 AK6-006 protein_coding Homo_sapiens 0 726
ENST00000622236 AK6-003 protein_coding Homo_sapiens 0 979
ENST00000622801 AK6-007 protein_coding Homo_sapiens 0 621
ENST00000625009 TAF9-012 protein_coding Homo_sapiens 1e-28 130

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