C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capicua homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167379 Cic-004 ENSMUSG00000005442 10090 + 7:25285823-25294142 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167379
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167379 4.715±0.92 7.760±0.74 3.917±0.74 10.015±4.63 7.715±1.44 6.791±0.78 2.583±1.25 3.365±0.12 2.026±1.03 7.466±1.48 1.332±0.20 9.483±3.37 1.885±0.68 2.396±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000287 CIL_000287_0002 CGP 7:25242561-25294159
CIL_0005V7 CIL_0005V7_0002 CGP 7:25267704-25297986

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000160740 CIC-005 protein_coding Homo_sapiens 0 5064
ENST00000406017 CICP18-001 processed_pseudogene Homo_sapiens 0 641
ENST00000418553 CICP17-001 processed_pseudogene Homo_sapiens 0 656
ENST00000422015 CICP13-001 processed_pseudogene Homo_sapiens 0 660
ENST00000424045 CICP5-001 unprocessed_pseudogene Homo_sapiens 0 625
ENST00000432723 CICP7-001 processed_pseudogene Homo_sapiens 0 630
ENST00000432801 CICP22-001 processed_pseudogene Homo_sapiens 0 706
ENST00000434745 CICP11-001 processed_pseudogene Homo_sapiens 0 654
ENST00000440782 CICP3-001 processed_pseudogene Homo_sapiens 0 641
ENST00000442987 CICP27-001 processed_pseudogene Homo_sapiens 0 636
ENST00000443330 CICP20-001 processed_pseudogene Homo_sapiens 0 662
ENST00000444451 CICP9-001 processed_pseudogene Homo_sapiens 0 641
ENST00000447359 CICP4-001 processed_pseudogene Homo_sapiens 0 641
ENST00000455800 CICP8-001 processed_pseudogene Homo_sapiens 0 652
ENST00000457191 CICP6-001 processed_pseudogene Homo_sapiens 0 636
ENST00000502609 CICP16-001 processed_pseudogene Homo_sapiens 0 676
ENST00000523795 FO082796.1-201 protein_coding Homo_sapiens 1e-35 154
ENST00000572681 CIC-002 protein_coding Homo_sapiens 0 5079
ENST00000573349 CIC-007 protein_coding Homo_sapiens 0 1098
ENST00000575287 CIC-004 nonsense_mediated_decay Homo_sapiens 0 566
ENST00000575354 CIC-001 protein_coding Homo_sapiens 0 5070
ENST00000576505 CIC-006 protein_coding Homo_sapiens 0 1181
ENST00000592994 CICP19-001 unprocessed_pseudogene Homo_sapiens 0 636
ENST00000605013 CICP23-001 processed_pseudogene Homo_sapiens 0 630
ENST00000605464 CICP24-001 processed_pseudogene Homo_sapiens 5e-35 154
ENST00000611420 RP11-261C10.8-001 processed_pseudogene Homo_sapiens 0 671
ENST00000614242 RP13-580B18.2-001 processed_pseudogene Homo_sapiens 5e-35 154
ENST00000621407 RP11-356C4.6-001 unprocessed_pseudogene Homo_sapiens 0 619
ENST00000622706 AC138035.3-001 processed_pseudogene Homo_sapiens 0 630

Loading