C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing Tcp1, subunit 3 (gamma)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167718 Cct3-004 ENSMUSG00000001416 10090 + 3:88297153-88321507 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295688 CCT3-001 protein_coding Homo_sapiens 0 1805
ENST00000368256 CCT3-008 processed_transcript Homo_sapiens 0 267
ENST00000368258 CCT3-015 nonsense_mediated_decay Homo_sapiens 0 1805
ENST00000368259 CCT3-017 protein_coding Homo_sapiens 0 1694
ENST00000368261 CCT3-010 processed_transcript Homo_sapiens 0 540
ENST00000368262 CCT3-016 nonsense_mediated_decay Homo_sapiens 0 1805
ENST00000413555 CCT3-014 protein_coding Homo_sapiens 0 787
ENST00000415548 CCT3-011 protein_coding Homo_sapiens 0 267
ENST00000446905 CCT3-013 protein_coding Homo_sapiens 0 484
ENST00000463132 CCT3-012 processed_transcript Homo_sapiens 0 597
ENST00000472765 CCT3-004 protein_coding Homo_sapiens 0 1805
ENST00000478640 CCT3-019 protein_coding Homo_sapiens 0 403
ENST00000490221 CCT3-006 retained_intron Homo_sapiens 0 595
ENST00000496684 CCT3-021 protein_coding Homo_sapiens 0 713
ENST00000533194 CCT3-020 protein_coding Homo_sapiens 0 544

Loading