C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | coronin, actin binding protein 1C | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000168399  |
Coro1c-005 |
ENSMUSG00000004530 |
10090 | - |
5:113865759-113882431  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001VQ | CIL_0001VQ_0002 | CGP | 5:113817798-113908758 |
| CIL_0001GO | CIL_0001GO_0003 | CGP | 5:113842436-113993894 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000147 | TAS | actin cortical patch assembly |
| GO:0005856 | TAS | cytoskeleton |
| GO:0006909 | TAS | phagocytosis |
| GO:0015629 | IBA | actin cytoskeleton |
| GO:0030036 | IBA | actin cytoskeleton organization |
| GO:0051015 | IBA | actin filament binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000039796
|
coro1cb-201 | protein_coding | Danio_rerio | 2e-31 | 139 |
|
ENSDART00000141446
|
coro1cb-001 | protein_coding | Danio_rerio | 2e-31 | 139 |
|
ENSDART00000140640
|
coro1cb-002 | protein_coding | Danio_rerio | 8e-30 | 134 |
|
ENSDART00000004217
|
coro1ca-001 | protein_coding | Danio_rerio | 4e-28 | 128 |
