C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 19B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168461 Rnf19b-202 ENSMUSG00000028793 10090 + 4:129058271-129084526 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168461
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168461 4.434±2.05 11.431±1.19 22.247±1.10 4.907±2.44 6.859±0.00 2.449±0.76 4.372±1.82 8.434±1.81 1.954±0.00 4.026±0.80 13.043±1.04 7.675±3.08 97.063±34.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0002 VISTA 4:128504346-129105789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0042267 IMP natural killer cell mediated cytotoxicity
GO:0044194 IDA cytolytic granule
GO:0072643 IMP interferon-gamma secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000235150 RNF19B-004 protein_coding Homo_sapiens 0 2911
ENST00000356990 RNF19B-002 protein_coding Homo_sapiens 0 2350
ENST00000373456 RNF19B-001 protein_coding Homo_sapiens 0 3105
ENST00000454567 AP000705.6-001 processed_pseudogene Homo_sapiens 0 267
ENST00000458209 RNF19BPY-001 processed_pseudogene Homo_sapiens 0 289
ENST00000572263 AP000705.6-001 processed_pseudogene Homo_sapiens 0 267

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