C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 385A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168828 Zfp385a-201 ENSMUSG00000000552 10090 - 15:103313895-103340086 protein_coding

Mus musculus EnsemblGRCm38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000168828
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000168828 7.082±4.51 2.083±1.24 3.244±1.25 7.905±7.30 12.492±5.79 2.524±0.71 2.135±0.75 0.712±0.15 3.288±1.48 1.348±0.45 1.995±1.24 2.508±1.58 2.400±2.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084M CIL_00084M_0002 VISTA 15:102713812-103314964
CIL_000035 CIL_000035_0002 CGP 15:103308236-103340086
CIL_000031 CIL_000031_0002 CGP 15:103313895-103366763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0002039 IEA p53 binding
GO:0003730 IDA mRNA 3'-UTR binding
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IMP apoptotic process
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0007599 IMP hemostasis
GO:0007611 IMP learning or memory
GO:0007626 IMP locomotory behavior
GO:0008270 IEA zinc ion binding
GO:0008298 IMP intracellular mRNA localization
GO:0010609 IMP mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0030220 IMP platelet formation
GO:0030425 IDA dendrite
GO:0035855 NAS megakaryocyte development
GO:0043025 IDA neuronal cell body
GO:0044822 IEA poly(A) RNA binding
GO:0045600 IMP positive regulation of fat cell differentiation
GO:0070889 IMP platelet alpha granule organization
GO:1902164 ISS positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:1902166 ISS negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000765 IMP regulation of cytoplasmic translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338010 ZNF385A-001 protein_coding Homo_sapiens 0 3066
ENST00000352268 ZNF385A-002 protein_coding Homo_sapiens 0 2109
ENST00000394313 ZNF385A-007 protein_coding Homo_sapiens 0 3005
ENST00000546919 ZNF385A-011 protein_coding Homo_sapiens 0 1037
ENST00000546970 ZNF385A-003 protein_coding Homo_sapiens 0 3005
ENST00000547210 ZNF385A-012 protein_coding Homo_sapiens 0 723
ENST00000549937 ZNF385A-015 protein_coding Homo_sapiens 0 464
ENST00000549962 ZNF385A-013 protein_coding Homo_sapiens 0 496
ENST00000550120 ZNF385A-014 protein_coding Homo_sapiens 0 204
ENST00000550774 ZNF385A-010 protein_coding Homo_sapiens 0 704
ENST00000550779 ZNF385A-005 nonsense_mediated_decay Homo_sapiens 0 2344
ENST00000551109 ZNF385A-006 protein_coding Homo_sapiens 0 3005
ENST00000551771 ZNF385A-008 protein_coding Homo_sapiens 0 839
ENST00000551864 ZNF385A-016 processed_transcript Homo_sapiens 0 351
ENST00000552382 ZNF385A-009 processed_transcript Homo_sapiens 0 1953

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