C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratinocyte associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168900 Krtcap2-004 ENSMUSG00000042747 10090 + 3:89246434-89249709 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000168900
Transcript ID Adipose Bladder Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000168900 26.447±4.68 32.169±0.69 29.736±9.23 15.775±2.27 18.526±2.20 29.320±3.96 47.984±6.20 92.123±35.57 5.936±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064S CIL_00064S_0002 CGP 3:89234177-89249906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295682 KRTCAP2-001 protein_coding Homo_sapiens 0 516
ENST00000461136 KRTCAP2-011 processed_transcript Homo_sapiens 0 309
ENST00000463527 KRTCAP2-005 processed_transcript Homo_sapiens 0 248
ENST00000471891 KRTCAP2-009 processed_transcript Homo_sapiens 0 344
ENST00000473363 RP11-201K10.3-001 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000482246 KRTCAP2-012 processed_transcript Homo_sapiens 4.99983e-42 174
ENST00000487350 KRTCAP2-008 processed_transcript Homo_sapiens 0 516
ENST00000490672 KRTCAP2-003 processed_transcript Homo_sapiens 0 252
ENST00000491084 KRTCAP2-006 processed_transcript Homo_sapiens 0 516
ENST00000492892 KRTCAP2-010 processed_transcript Homo_sapiens 0 481
ENST00000497317 KRTCAP2-004 processed_transcript Homo_sapiens 0 497

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