C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metadherin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168991 Mtdh-010 ENSMUSG00000022255 10090 + 15:34083036-34134344 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaTestisENSMUST00000168991
Transcript ID Breast Ovary Placenta Testis
ENSMUST00000168991 8.492±0.00 18.211±0.00 25.704±1.38 25.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L2 CIL_0001L2_0002 CGP 15:33683876-34142386
CIL_0001KW CIL_0001KW_0002 CGP 15:34082694-34284295

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 ISO double-stranded RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336273 MTDH-001 protein_coding Homo_sapiens 0 680
ENST00000519934 MTDH-002 protein_coding Homo_sapiens 0 508
ENST00000521933 MTDH-006 protein_coding Homo_sapiens 0 484

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