C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169214 Rbm28-002 ENSMUSG00000029701 10090 - 6:29125142-29155091 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderHeartLiverMuscleOvaryPlacentaENSMUST00000169214
Transcript ID Adipose Bladder Heart Liver Muscle Ovary Placenta
ENSMUST00000169214 4.174±0.19 5.930±1.44 1.493±0.00 4.281±2.35 3.102±0.62 5.116±1.94 8.180±3.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HQ CIL_0006HQ_0003 CGP 6:29060220-29165006
CIL_0001OF CIL_0001OF_0002 CGP 6:29123573-29179584

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223073 RBM28-001 protein_coding Homo_sapiens 0 1400
ENST00000415472 RBM28-002 protein_coding Homo_sapiens 0 1400
ENST00000481788 RBM28-007 processed_transcript Homo_sapiens 0 396
ENST00000487602 RBM28-006 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000495327 RBM28-008 retained_intron Homo_sapiens 0 272

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