C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capicua homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169266 Cic-001 ENSMUSG00000005442 10090 + 7:25267704-25294159 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169266 3.890±1.60 8.682±2.78 2.894±1.37 5.476±2.34 10.298±4.66 6.394±1.73 2.047±0.62 3.141±0.67 1.391±0.30 5.129±2.03 2.247±0.92 5.227±2.14 2.878±2.56 3.675±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000287 CIL_000287_0002 CGP 7:25242561-25294159
CIL_0005V7 CIL_0005V7_0002 CGP 7:25267704-25297986

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0048286 IGI lung alveolus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000160740 CIC-005 protein_coding Homo_sapiens 0 5984
ENST00000406017 CICP18-001 processed_pseudogene Homo_sapiens 0 1062
ENST00000418553 CICP17-001 processed_pseudogene Homo_sapiens 0 1074
ENST00000422015 CICP13-001 processed_pseudogene Homo_sapiens 0 1099
ENST00000424045 CICP5-001 unprocessed_pseudogene Homo_sapiens 0 1014
ENST00000432723 CICP7-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000432801 CICP22-001 processed_pseudogene Homo_sapiens 0 852
ENST00000434745 CICP11-001 processed_pseudogene Homo_sapiens 0 1066
ENST00000440782 CICP3-001 processed_pseudogene Homo_sapiens 0 1018
ENST00000442987 CICP27-001 processed_pseudogene Homo_sapiens 0 1046
ENST00000443330 CICP20-001 processed_pseudogene Homo_sapiens 0 1046
ENST00000444451 CICP9-001 processed_pseudogene Homo_sapiens 0 808
ENST00000447359 CICP4-001 processed_pseudogene Homo_sapiens 0 1057
ENST00000455800 CICP8-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000457191 CICP6-001 processed_pseudogene Homo_sapiens 0 1035
ENST00000502609 CICP16-001 processed_pseudogene Homo_sapiens 0 1122
ENST00000523795 FO082796.1-201 protein_coding Homo_sapiens 1e-35 154
ENST00000571942 CIC-008 protein_coding Homo_sapiens 0 405
ENST00000572681 CIC-002 protein_coding Homo_sapiens 0 9262
ENST00000573349 CIC-007 protein_coding Homo_sapiens 0 1098
ENST00000575287 CIC-004 nonsense_mediated_decay Homo_sapiens 0 566
ENST00000575354 CIC-001 protein_coding Homo_sapiens 0 5958
ENST00000575839 CIC-009 processed_transcript Homo_sapiens 1.4013e-45 185
ENST00000576505 CIC-006 protein_coding Homo_sapiens 0 1181
ENST00000592994 CICP19-001 unprocessed_pseudogene Homo_sapiens 0 1035
ENST00000605013 CICP23-001 processed_pseudogene Homo_sapiens 0 1035
ENST00000605464 CICP24-001 processed_pseudogene Homo_sapiens 5e-35 154
ENST00000611420 RP11-261C10.8-001 processed_pseudogene Homo_sapiens 0 1086
ENST00000614242 RP13-580B18.2-001 processed_pseudogene Homo_sapiens 5e-35 154
ENST00000621407 RP11-356C4.6-001 unprocessed_pseudogene Homo_sapiens 0 1029
ENST00000622706 AC138035.3-001 processed_pseudogene Homo_sapiens 0 1040

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