C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 39C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169401 Ttc39c-004 ENSMUSG00000024424 10090 + 18:12599926-12737050 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169401
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169401 2.902±1.49 1.839±0.14 4.304±2.23 2.369±1.15 0.641±0.04 2.880±0.21 2.679±1.97 0.803±0.31 0.359±0.09 6.031±2.19 2.023±1.09 10.692±1.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WU CIL_0005WU_0002 CGP 18:12333819-12737050
CIL_0005WT CIL_0005WT_0002 CGP 18:12599926-12755146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304621 TTC39C-002 protein_coding Homo_sapiens 0 2113
ENST00000317571 TTC39C-001 protein_coding Homo_sapiens 0 2113
ENST00000540918 TTC39C-006 protein_coding Homo_sapiens 0 1075
ENST00000578150 TTC39C-003 processed_transcript Homo_sapiens 0 246
ENST00000579214 TTC39C-007 protein_coding Homo_sapiens 0 374
ENST00000584095 TTC39C-010 retained_intron Homo_sapiens 0 322
ENST00000584424 TTC39C-005 retained_intron Homo_sapiens 0 627

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