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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PDZ domain containing 7 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000169459  |
Pdzd7-201 |
ENSMUSG00000074818 |
10090 | - |
19:45026907-45045772  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008BD | CIL_0008BD_0002 | VISTA | 19:44496521-45098014 |
| CIL_0007U1 | CIL_0007U1_0002 | VISTA | 19:44501251-45102539 |
| CIL_000940 | CIL_000940_0002 | VISTA | 19:44925545-45526320 |
| CIL_0005ND | CIL_0005ND_0002 | CGP | 19:45006558-45027104 |
| CIL_0001C9 | CIL_0001C9_0003 | CGP | 19:45015176-45046614 |
| CIL_0005NG | CIL_0005NG_0002 | CGP | 19:45026906-45056383 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000370215
|
PDZD7-003 | protein_coding | Homo_sapiens | 0 | 1681 |
|
ENST00000370220
|
LZTS2-001 | protein_coding | Homo_sapiens | 2e-36 | 159 |
|
ENST00000370223
|
LZTS2-002 | protein_coding | Homo_sapiens | 1e-36 | 159 |
|
ENST00000433616
|
PDZD7-005 | protein_coding | Homo_sapiens | 0 | 667 |
|
ENST00000470414
|
PDZD7-001 | protein_coding | Homo_sapiens | 0 | 643 |
|
ENST00000474125
|
PDZD7-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 857 |
|
ENST00000476306
|
PDZD7-002 | retained_intron | Homo_sapiens | 0 | 315 |
|
ENST00000619208
|
PDZD7-201 | protein_coding | Homo_sapiens | 0 | 2765 |
