C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PDZ domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169459 Pdzd7-201 ENSMUSG00000074818 10090 - 19:45026907-45045772 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BD CIL_0008BD_0002 VISTA 19:44496521-45098014
CIL_0007U1 CIL_0007U1_0002 VISTA 19:44501251-45102539
CIL_000940 CIL_000940_0002 VISTA 19:44925545-45526320
CIL_0005ND CIL_0005ND_0002 CGP 19:45006558-45027104
CIL_0001C9 CIL_0001C9_0003 CGP 19:45015176-45046614
CIL_0005NG CIL_0005NG_0002 CGP 19:45026906-45056383

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370215 PDZD7-003 protein_coding Homo_sapiens 0 1681
ENST00000370220 LZTS2-001 protein_coding Homo_sapiens 2e-36 159
ENST00000370223 LZTS2-002 protein_coding Homo_sapiens 1e-36 159
ENST00000433616 PDZD7-005 protein_coding Homo_sapiens 0 667
ENST00000470414 PDZD7-001 protein_coding Homo_sapiens 0 643
ENST00000474125 PDZD7-004 nonsense_mediated_decay Homo_sapiens 0 857
ENST00000476306 PDZD7-002 retained_intron Homo_sapiens 0 315
ENST00000619208 PDZD7-201 protein_coding Homo_sapiens 0 2765

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