C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17136
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169993 Gm17136-001 ENSMUSG00000057945 10090 + 7:126176124-126176534 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000169993
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000169993 0.374±0.17 0.110±0.00 0.155±0.03 0.296±0.00 0.556±0.32 0.202±0.06 0.460±0.15 0.153±0.16 0.431±0.22 0.197±0.01 0.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TQ CIL_0005TQ_0002 CGP 7:125878419-126200501
CIL_0005TT CIL_0005TT_0002 CGP 7:126101715-126294999

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 555
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 540
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 571
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 401
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 571
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 571
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 571
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 444
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 520
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 457
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 420
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 540
ENST00000443015 AC133141.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 507
ENST00000496255 RP11-473P24.2-001 processed_pseudogene Homo_sapiens 0 398
ENST00000497682 H3F3AP3-001 processed_pseudogene Homo_sapiens 0 468
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 451
ENST00000547971 RP11-98E6.1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000559063 CTD-2651B20.2-001 processed_pseudogene Homo_sapiens 0 412
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000603240 RP11-27M5.1-001 processed_pseudogene Homo_sapiens 2e-31 139
ENST00000619270 CTD-2062A1.2-001 processed_pseudogene Homo_sapiens 0 261

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