C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170122 Rps27-201 ENSMUSG00000090733 10090 - 3:90212725-90213615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170122
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170122 219.456±80.59 176.285±53.26 811.540±103.58 201.826±124.91 224.407±81.24 221.110±120.12 90.452±26.07 212.560±40.89 297.938±201.28 185.594±59.02 494.745±44.58 1026.438±2024.46 1410.715±1668.16 119.727±55.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368567 RPS27-001 protein_coding Homo_sapiens 0 418
ENST00000392558 RPS27-002 protein_coding Homo_sapiens 0 193
ENST00000402023 RPS27P15-001 processed_pseudogene Homo_sapiens 0 318
ENST00000422457 RP11-175B9.3-001 processed_pseudogene Homo_sapiens 0 407
ENST00000423216 RP3-423B22.5-001 processed_pseudogene Homo_sapiens 0 396
ENST00000425207 AC002075.4-001 processed_pseudogene Homo_sapiens 0 375
ENST00000426040 AC098614.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000434429 RP11-20O24.1-001 processed_pseudogene Homo_sapiens 0 359
ENST00000438127 AP000936.1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000455497 RP11-360D2.2-001 processed_pseudogene Homo_sapiens 0 363
ENST00000457554 RP11-761N21.2-001 processed_pseudogene Homo_sapiens 0 418
ENST00000463110 RPS27P29-001 processed_pseudogene Homo_sapiens 0 375
ENST00000469695 AC090602.2-001 processed_pseudogene Homo_sapiens 0 339
ENST00000477151 RPS27-004 processed_transcript Homo_sapiens 0 407
ENST00000480875 RP11-10G12.1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000486977 RP11-25I15.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000487608 RPS27P23-001 processed_pseudogene Homo_sapiens 0 320
ENST00000492051 RPS27P20-001 processed_pseudogene Homo_sapiens 0 211
ENST00000493224 RPS27-003 processed_transcript Homo_sapiens 0 407
ENST00000495392 RP11-543P15.1-001 processed_pseudogene Homo_sapiens 0 412
ENST00000496370 RPS27P14-001 processed_pseudogene Homo_sapiens 0 318
ENST00000509147 RP11-147K6.2-001 processed_pseudogene Homo_sapiens 0 246
ENST00000604416 RP11-1029M24.4-001 processed_pseudogene Homo_sapiens 1.96182e-44 182
ENST00000611920 RPS27P14-001 processed_pseudogene Homo_sapiens 0 318

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