C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: origin recognition complex, subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170141 Orc6-202 ENSMUSG00000031697 10090 + 8:85299632-85308278 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000170141
Transcript ID Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000170141 2.785±0.76 3.587±0.00 0.520±0.00 0.446±0.00 5.894±0.42 0.473±0.26 2.873±0.37 5.227±0.71 1.143±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VM CIL_0002VM_0002 CGP 8:85260397-85308278
CIL_00044W CIL_00044W_0003 CGP 8:85299632-85386345

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005664 IEA nuclear origin of replication recognition complex
GO:0006261 IMP DNA-dependent DNA replication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219097 ORC6-001 protein_coding Homo_sapiens 0 390
ENST00000563306 ORC6-003 retained_intron Homo_sapiens 0 357
ENST00000563599 ORC6-004 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000566860 ORC6-005 protein_coding Homo_sapiens 0 390
ENST00000567000 ORC6-007 retained_intron Homo_sapiens 8e-31 139
ENST00000568364 ORC6-006 protein_coding Homo_sapiens 0 261
ENST00000569239 ORC6-002 retained_intron Homo_sapiens 0 261
ENST00000570260 ORC6-008 processed_transcript Homo_sapiens 0 261
ENST00000575571 ORC6-009 processed_transcript Homo_sapiens 4e-31 139

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