C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine VI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170155 Cpne6-002 ENSMUSG00000022212 10090 + 14:55510475-55517430 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000170155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000170155 0.020±0.01 0.030±0.02 0.200±0.00 3.255±3.63 0.005±0.00 0.022±0.01 0.012±0.00 0.031±0.00 0.006±0.00 0.010±0.00 0.033±0.02 0.039±0.03 0.057±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031H CIL_00031H_0002 CGP 14:55491093-55517431
CIL_0003F9 CIL_0003F9_0002 CGP 14:55510445-55524981

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397016 CPNE6-003 protein_coding Homo_sapiens 0 761
ENST00000460657 CPNE6-002 retained_intron Homo_sapiens 0 712
ENST00000537691 CPNE6-201 protein_coding Homo_sapiens 0 761
ENST00000557829 CPNE6-006 retained_intron Homo_sapiens 0 429
ENST00000557889 CPNE6-017 protein_coding Homo_sapiens 0 206
ENST00000558450 CPNE6-014 protein_coding Homo_sapiens 0 534
ENST00000558541 CPNE6-018 protein_coding Homo_sapiens 0 675
ENST00000558795 CPNE6-005 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000558859 CPNE6-011 protein_coding Homo_sapiens 0 353
ENST00000558995 CPNE6-004 retained_intron Homo_sapiens 0 761
ENST00000559197 CPNE6-019 protein_coding Homo_sapiens 0 542
ENST00000559207 CPNE6-013 protein_coding Homo_sapiens 0 479
ENST00000559778 CPNE6-016 protein_coding Homo_sapiens 0 407
ENST00000560092 CPNE6-008 processed_transcript Homo_sapiens 0 353
ENST00000560356 CPNE6-015 protein_coding Homo_sapiens 0 573
ENST00000560761 CPNE6-010 protein_coding Homo_sapiens 0 614
ENST00000560828 CPNE6-009 protein_coding Homo_sapiens 0 573
ENST00000560845 CPNE6-007 retained_intron Homo_sapiens 0 270
ENST00000560884 CPNE6-012 protein_coding Homo_sapiens 0 573

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