C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metadherin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170553 Mtdh-009 ENSMUSG00000022255 10090 + 15:34083322-34123750 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000170553
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000170553 22.604±0.00 22.473±0.00 29.698±3.08 41.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L2 CIL_0001L2_0002 CGP 15:33683876-34142386
CIL_0001KW CIL_0001KW_0002 CGP 15:34082694-34284295

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336273 MTDH-001 protein_coding Homo_sapiens 0 536
ENST00000519934 MTDH-002 protein_coding Homo_sapiens 0 394
ENST00000521933 MTDH-006 protein_coding Homo_sapiens 0 226
ENST00000522313 MTDH-003 protein_coding Homo_sapiens 0 351
ENST00000598402 RP11-15H20.2-001 processed_pseudogene Homo_sapiens 2e-33 147

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